PHATRDRAFT_9989 dead (asp-glu-ala-asp) box polypeptide 55 (SrmB)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_9989 chr_2 dead (asp-glu-ala-asp) box polypeptide 55 (SrmB) 901775 904035 +
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0201
Normalized Mean Residue
Phatr_bicluster_0215
0.22
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 108.864 8.40E-28 255 - 399 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 108.864 8.40E-28 255 - 399 superfamily 238034
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 171.514 2.20E-49 1 - 196 superfamily 266587
DUF4217 superfamily Domain of unknown function (DUF4217); This short domain is found at the C-terminus of many helicase... - 98.6404 7.53E-25 430 - 493 superfamily 258212
DUF4217 superfamily Domain of unknown function (DUF4217); This short domain is found at the C-terminus of many helicase... - 98.6404 7.53E-25 430 - 493 superfamily 258212
SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription /... - 258.182 9.25E-78 1 - 405 multi-dom 223587
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
34027 Not available 209044 237110 41278 Not available AT5G05450.1 309392
KEGG description KEGG Pathway
Not available Not available
Not available -
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