10042 RAP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10042 chr_15 RAP 94649 96028 - RAP

Synonyms

NCBI ID Ensembl Genomes exon ID
7441870 Thaps10042.2, Thaps10042.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0339

Most Highly Correlated Transcripts

4108

hypothetical protein
0.8535

bd1788

(bd1788) NA
0.7565

bd1802

(bd1802) NA
0.7529

bd739

(bd739) NA
0.744

bd740

(bd740) NA
0.7091

263917

0.7029

bd1813

(bd1813) NA
0.7016

bd616

(bd616) NA
0.6967

9240

hypothetical protein
0.696

bd895

(bd895) NA
0.6955

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RAP RAP domain; This domain is found in various eukaryotic species, where it is found in proteins that... cl17746 65.6715 8.86E-14 338 - 396 specific 254762
RAP superfamily RAP domain; This domain is found in various eukaryotic species, where it is found in proteins that... - 65.6715 8.86E-14 338 - 396 superfamily 266808

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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