10567 (GFA_2) PTZ00295
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10567 chr_17 (GFA_2) PTZ00295 87715 90896 + PTZ00295

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0175

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0116
 0.38

Most Highly Correlated Transcripts

270222

0.9023

39696

PTZ00295
0.8856

bd176

(bd176) PP2Cc
0.8608

bd1662

(bd1662) TIGR00367
0.8503

261711

Sulfotransfer_1 superfamily
0.8413

16295

FBPase
0.8176

26136

MRS6 superfamily
0.8135

4767

hypothetical protein
0.8128

bd789

(bd789) ABC_ATPase superfamily
0.8082

bd393

(bd393) nst superfamily
0.7996

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GFAT Glutamine amidotransferases class-II (Gn-AT)_GFAT-type. This domain is found at the N-terminus of... cl00319 265.465 1.55E-83 86 - 308 specific 238366
Gn_AT_II superfamily Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen... - 265.465 1.55E-83 86 - 308 superfamily 260351
SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and... cl00389 136.238 3.89E-37 561 - 698 specific 240142
SIS superfamily SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and... - 130.31 2.42E-35 383 - 510 superfamily 260399
SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and... cl00389 130.31 2.42E-35 383 - 510 specific 240141
SIS superfamily SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and... - 130.31 2.42E-35 383 - 510 superfamily 260399
PTZ00295 glucosamine-fructose-6-phosphate aminotransferase; Provisional - 661.717 0 83 - 691 multi-dom 240349

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
3903 Not available 192550 164643 437125 Cre09.g398252.t1.1 AT4G23430.2 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0008152 GO:0005529 GO:0005975 GO:0004360 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0005529

NA

Details: 
NA
GO Category: 
NA

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0004360

glutamine-fructose-6-phosphate transaminase (isomerizing) activity

Details: 
Catalysis of the reaction: beta-D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate.
GO Category: 
MF

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