10613 (Tp_HSF_4.2c) HSF_DNA-bind
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
10613 chr_17 (Tp_HSF_4.2c) HSF_DNA-bind 225188 227414 + HSF_DNA-bind
NCBI ID Ensembl Genomes exon ID
7444191 Thaps10613.2, Thaps10613.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0425
Normalized Mean Residue
Thaps_bicluster_0076
0.36
COG3899
0.8856
hypothetical protein
0.8833
hypothetical protein
0.8806
Piwi-like superfamily
0.8804
Gly_transf_sug superfamily
0.872
hypothetical protein
0.8718
COG0116
0.8659
zf-UBR
0.8627
hypothetical protein
0.8626
hypothetical protein
0.8576
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HSF_DNA-bind HSF-type DNA-binding; HSF-type DNA-binding. cl12113 103.734 3.36E-26 442 - 537 specific 249865
HSF_DNA-bind superfamily HSF-type DNA-binding; HSF-type DNA-binding. - 103.734 3.36E-26 442 - 537 superfamily 264552
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48361 PHATRDRAFT_48361 202287 202335 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003700 GO:0005634 GO:0006355 GO:0003676 GO:0003677 -

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF
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