10788 Methyltransf_21Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10788	chr_18	Methyltransf_21	111879	113384	+	Methyltransf_21

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450933	Thaps10788.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0429

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0089	0.36	110 0.00075

Most Highly Correlated Transcripts

35728 FtsZ_type1 0.8622	32098 PTZ00063 0.8594	13448 Sec1 0.8493	7304 hypothetical protein 0.8474	25453 hypothetical protein 0.8431	38473 Mob1_phocein superfamily 0.841
10558 HAD-SF-IIA-hyp4 0.8382	12899 AAA 0.8369	882 hypothetical protein 0.8358	23791 hypothetical protein 0.834

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Methyltransf_21		Methyltransferase FkbM domain; This family has members from bacteria to human, and appears to be a...	cl17387	68.8712	9.98E-14	264 - 438	specific	252973
Methyltransf_21 superfamily		Methyltransferase FkbM domain; This family has members from bacteria to human, and appears to be a...	-	68.8712	9.98E-14	264 - 438	superfamily	266660

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
19977		Not available	Not available	Not available	Not available	Cre09.g401256.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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