11213 PhyH superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11213	chr_19a_19	PhyH superfamily	465767	468273	+	PhyH superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444324	Thaps11213.4, Thaps11213.3, Thaps11213.2, Thaps11213.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0416

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0150	0.38	0.016 100

Most Highly Correlated Transcripts

bd848 (bd848) NA 0.9049	bd764 (bd764) NA 0.9014	32366 Pumilio 0.8685	268374 (PDHA1) TPP_E1_PDC_ADC_BCADC 0.8528	268581 hypothetical protein 0.8498	36650 hypothetical protein 0.8482
12899 AAA 0.8448	10626 hypothetical protein 0.8396	41979 PRK06116 0.8315	7134 hypothetical protein 0.8303

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PhyH superfamily		Phytanoyl-CoA dioxygenase (PhyH); This family is made up of several eukaryotic phytanoyl-CoA...	-	72.102	1.92E-14	142 - 344	superfamily	266621

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48742	PHATRDRAFT_48742	252089	306064	441662	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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