11247 Methyltransf_7 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11247	chr_19a_19	Methyltransf_7 superfamily	565347	566738	+	Methyltransf_7 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444344	Thaps11247.2, Thaps11247.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0001

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0063	0.47	47 0.059

Most Highly Correlated Transcripts

40323 CPSaseII_lrg 0.7956	plastid_psb28 0.7932	17854 HemeO 0.777	268474 PLN02657 0.7757	33008 PLN02338 0.7728	plastidpB 0.7726
38272 NAD_binding_8 superfamily 0.7726	25478 hypothetical protein 0.7583	38707 Aldolase_Class_I superfamily 0.7551	18796 UMP_CMP_kin_fam 0.7541

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Methyltransf_7 superfamily		SAM dependent carboxyl methyltransferase; This family of plant methyltransferases contains enzymes...	-	94.2816	6.44E-22	90 - 320	superfamily	262027

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	210419	17762	254918	Not available	AT1G68040.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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