11612 AFD_class_I superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
11612 chr_20 AFD_class_I superfamily 657289 662291 - AFD_class_I superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0282
Normalized Mean Residue
Thaps_bicluster_0020
0.47
ybbN
0.8595
RRM_SF superfamily
0.8472
(bd733) NA
0.8322
COG3899
0.8305
COG3899
0.8299
hypothetical protein
0.8247
NAD_binding_8 superfamily
0.8227
(Tp_Myb4R1b) SANT
0.8099
COG3899
0.8073
PRK09427
0.8067
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 68.5642 3.16E-13 935 - 1110 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 68.5642 3.16E-13 935 - 1110 superfamily 238125
AFD_class_I superfamily Adenylate forming domain, Class I; This family includes acyl- and aryl-CoA ligases, as well as the... - 190.124 1.25E-51 352 - 784 superfamily 266508
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49500 PHATRDRAFT_49500 243715 Not available 468086 Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003824 GO:0008152 GO:0031177 GO:0048037 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

phosphopantetheine binding

Details: 
Interacting selectively and non-covalently with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate).
GO Category: 
MF

cofactor binding

Details: 
Interacting selectively and non-covalently with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.
GO Category: 
MF
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