11752 2OG-FeII_Oxy_3
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11752 chr_22 2OG-FeII_Oxy_3 361631 362747 - 2OG-FeII_Oxy_3

Synonyms

NCBI ID Ensembl Genomes exon ID
7443859 Thaps11752.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0050

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0194
 0.41

Most Highly Correlated Transcripts

37539

cpn10
0.8439

36007

Aldolase_II superfamily
0.8365

36641

Aldolase_Class_I superfamily
0.8347

15027

PLN00137
0.8315

11836

hypothetical protein
0.8295

9598

hypothetical protein
0.8284

23018

RNase_PH superfamily
0.8273

31150

rpsI
0.8258

33203

AAT_I superfamily
0.8231

22996

Ntn_hydrolase superfamily
0.8219

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
2OG-FeII_Oxy_3 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... cl17304 72.4566 5.10E-16 229 - 347 specific 257950
2OG-FeII_Oxy_3 superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 72.4566 5.10E-16 229 - 347 superfamily 266616

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 192463 307527 209347 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006520 GO:0016491 -

GO:0006520

cellular amino acid metabolic process

Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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