1283 (MTS2_1) TGT superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
1283 chr_1 (MTS2_1) TGT superfamily 1129381 1130881 + TGT superfamily
NCBI ID Ensembl Genomes exon ID
7446831 Thaps1283.1, Thaps1283.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0196
Normalized Mean Residue
Thaps_bicluster_0274
0.39
DUF72
0.9058
hypothetical protein
0.8829
(bd392) DEXDc
0.8825
hypothetical protein
0.8749
Prenylcys_lyase superfamily
0.8736
ABC_ATPase superfamily
0.8718
(bd1837) NA
0.8693
hypothetical protein
0.8674
(bd874) NA
0.8651
hypothetical protein
0.8608
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TGT superfamily Queuine tRNA-ribosyltransferase; This is a family of queuine tRNA-ribosyltransferases EC:2.4.2.29,... - 455.821 5.65E-158 79 - 476 superfamily 267577
Tgt Queuine/archaeosine tRNA-ribosyltransferase [Translation, ribosomal structure and biogenesis] - 375.832 1.15E-126 82 - 476 multi-dom 223420
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 225713 294853 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0006400 GO:0008479 GO:0008616 -

tRNA modification

Details: 
The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically.
GO Category: 
BP

queuine tRNA-ribosyltransferase activity

Details: 
Catalysis of the reaction: tRNA guanine + queuine = tRNA queuine + guanine.
GO Category: 
MF

queuosine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.
GO Category: 
BP
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