261431 ABC_ATPase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261431 chr_2 ABC_ATPase superfamily 1390361 1391249 + ABC_ATPase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443036 Thaps261431.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0196

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0247
 0.36

Most Highly Correlated Transcripts

262348

53EXOc
0.9207

23740

DUF72
0.9149

22785

DUF336
0.9071

3354

hypothetical protein
0.8994

8129

hypothetical protein
0.8987

8376

hypothetical protein
0.8987

10895

PLN02852
0.8922

269988

tRNA_Me_trans
0.8912

22322

PHear_NECAP
0.8901

261734

2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_
0.8899

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 106.111 3.21E-27 122 - 295 superfamily 266551
cbiO cobalt transport protein ATP-binding subunit; This model describes the ATP binding subunit of the... - 65.137 4.87E-13 122 - 294 multi-dom 130234

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd192 PHATRDRAFT_bd192 153563 163451 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0016887 GO:0000166 GO:0017111 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

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