15605 PKc_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
15605 chr_7 PKc_like superfamily 1823546 1824973 + PKc_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447200 Thaps15605.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0321

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0100
 0.39

Most Highly Correlated Transcripts

35129

(Tp_Myb2R9) PLN03142
0.8779

20800

XRN_N superfamily
0.8769

23095

UBCc
0.8609

25647

hypothetical protein
0.8548

33033

YSH1
0.8435

262980

DEXDc
0.8421

260975

(nhe3) Na_H_Exchanger
0.8407

25161

hypothetical protein
0.8397

268475

C2 superfamily
0.8395

269726

Tryp_SPc
0.8394

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 92.3889 1.38E-22 232 - 341 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 92.3889 1.38E-22 232 - 341 superfamily 260155
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 92.3889 1.38E-22 232 - 341 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 92.3889 1.38E-22 232 - 341 superfamily 260155
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 119.547 5.93E-31 374 - 472 superfamily 263920
Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein... - 62.5415 1.55E-11 237 - 334 multi-dom 223736
Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein... - 62.5415 1.55E-11 237 - 334 multi-dom 223736

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005952 GO:0006468 GO:0008603 GO:0004672 GO:0004682 GO:0004691 GO:0005956 GO:0008605 -

GO:0005952

cAMP-dependent protein kinase complex

Details: 
An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer.
GO Category: 
CC

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0008603

cAMP-dependent protein kinase regulator activity

Details: 
Modulation of the activity of the enzyme cAMP-dependent protein kinase.
GO Category: 
MF

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0004682

NA

Details: 
NA
GO Category: 
NA

GO:0004691

cAMP-dependent protein kinase activity

Details: 
Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction requires the presence of cAMP.
GO Category: 
MF

GO:0005956

protein kinase CK2 complex

Details: 
A protein complex that possesses protein serine/threonine kinase activity, and contains two catalytic alpha subunits and two regulatory beta subunits. Protein kinase CK2 complexes are found in nearly every subcellular compartment, and can phosphorylate many protein substrates in addition to casein.
GO Category: 
CC

GO:0008605

NA

Details: 
NA
GO Category: 
NA

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