17349 SPFH_prohibitin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
17349 chr_1 SPFH_prohibitin 2641241 2642209 - SPFH_prohibitin

Synonyms

NCBI ID Ensembl Genomes exon ID
7445092 Thaps17349.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0200

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0263
 0.34

Most Highly Correlated Transcripts

17214

PLN02512
0.9004

36037

Trypsin_2
0.8992

13393

PLN02321
0.8939

39666

COG0523
0.8929

38964

Chorismate_synthase
0.8877

31829

CBS_like
0.8871

262977

NA
0.8841

4462

hypothetical protein
0.8763

16193

S49_Sppa_N_C
0.876

4524

DHQS
0.8759

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SPFH_prohibitin Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model... cl19107 266.687 8.96E-89 60 - 254 specific 259799
SPFH_like superfamily core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model... - 266.687 8.96E-89 60 - 254 superfamily 267460
PHB prohibitin homologues; prohibitin homologues - 93.8792 2.73E-23 59 - 220 multi-dom 214581

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12799 PHATRDRAFT_12799 208283 243442 442545 Cre02.g088000.t1.2 AT1G03860.3 354996

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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