39666 COG0523
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39666 chr_2 COG0523 2041050 2042409 + COG0523

Synonyms

NCBI ID Ensembl Genomes exon ID
7452348 Thaps39666.2, Thaps39666.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0200

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0263
 0.34

Most Highly Correlated Transcripts

268343

NA
0.9472

36078

PRX5_like
0.915

37934

GRX_PICOT_like
0.9008

38608

SDR_a5
0.9003

262977

NA
0.9003

24965

hypothetical protein
0.8983

36037

Trypsin_2
0.8975

25040

NA
0.8957

14192

PLN02449
0.8947

17349

SPFH_prohibitin
0.8929

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 217.509 8.77E-70 10 - 172 superfamily 266552
CobW_C Cobalamin synthesis protein cobW C-terminal domain; This is a large and diverse family of putative... cl08458 101.544 1.14E-26 240 - 336 specific 254355
CobW_C superfamily Cobalamin synthesis protein cobW C-terminal domain; This is a large and diverse family of putative... - 101.544 1.14E-26 240 - 336 superfamily 263667
COG0523 Putative GTPases (G3E family) [General function prediction only] - 301.907 1.71E-100 9 - 336 multi-dom 223597

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 211225 190581 73828 Cre14.g630871.t1.1 AT1G80480.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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