18378 Beach
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
18378 chr_9 Beach 169758 171878 + Beach

Synonyms

NCBI ID Ensembl Genomes exon ID
7444998 Thaps18378.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0363

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0016
 0.55

Most Highly Correlated Transcripts

36213

PKc_like superfamily
0.9218

32217

MA3
0.9207

168

(RPB1) PRK08566
0.9197

7299

hypothetical protein
0.9187

264679

Syja_N
0.9151

12500

SNF2_N
0.9115

262025

GH18_chitinase-like superfamily
0.9094

37638

HrpA
0.9092

262617

(Tp_Myb2R7) MYB DNA binding protein/ transcription factor-like protein
0.9066

3320

Abhydrolase_5
0.9029

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Beach BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a... cl10511 360.02 5.75E-119 465 - 703 specific 100117
Beach superfamily BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a... - 360.02 5.75E-119 465 - 703 superfamily 263990

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10805 PHATRDRAFT_10805 183026 193804 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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