18846 IFT46_B_C superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
18846	chr_22	IFT46_B_C superfamily	985758	986753	+	IFT46_B_C superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449446	Thaps18846.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0372

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0013	0.47	0.036 65

Most Highly Correlated Transcripts

269925 AAA_12 superfamily 0.8307	36007 Aldolase_II superfamily 0.8306	37497 cysE 0.7978	268443 SAICAR_synt_Sc 0.7921	35136 NA 0.7904	36088 PTZ00168 0.7817
38472 HA2 0.7809	260749 CHAT superfamily 0.7794	3459 Snf7 superfamily 0.7728	30701 PRK05279 0.7683

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
IFT46_B_C superfamily		Intraflagellar transport complex B protein 46 C terminal; This family of proteins is found in...	-	190.603	9.31E-59	94 - 301	superfamily	256975

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	67483	Cre05.g241637.t1.1	Not available	307050

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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