19813 AdoMet_dc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
19813 chr_20 AdoMet_dc 637069 638352 + AdoMet_dc

Synonyms

NCBI ID Ensembl Genomes exon ID
7447767 Thaps19813.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0392

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0082
 0.46

Most Highly Correlated Transcripts

bd737

(bd737) NA
0.9085

25280

hypothetical protein
0.9058

bd1692

(bd1692) NA
0.8782

21020

hypothetical protein
0.8668

24760

hypothetical protein
0.864

262659

Tryp_SPc
0.863

bd1890

(bd1890) NA
0.8624

264730

AdoMet_MTases superfamily
0.8465

7335

hypothetical protein
0.8463

26041

hypothetical protein
0.8429

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AdoMet_dc S-adenosylmethionine decarboxylase; This family contains several S-adenosylmethionine decarboxylase... cl00687 89.4836 7.68E-22 175 - 253 specific 251466
AdoMet_dc superfamily S-adenosylmethionine decarboxylase; This family contains several S-adenosylmethionine decarboxylase... - 89.4836 7.68E-22 175 - 253 superfamily 260572
AdoMet_MTases superfamily S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... - 87.9042 7.24E-20 325 - 426 superfamily 266528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_7617 PHATRDRAFT_7617 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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