20349 GH38-57_N_LamB_YdjC_SF superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20349 chr_17 GH38-57_N_LamB_YdjC_SF superfamily 536717 538002 - GH38-57_N_LamB_YdjC_SF superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453081 Thaps20349.1, Thaps20349.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0413

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0065
 0.48

Most Highly Correlated Transcripts

11399

hypothetical protein
0.9535

263191

PLN03076
0.9364

27435

PAH
0.9358

31437

Peptidase_M16 superfamily
0.9327

262004

CAP_ED
0.9309

2954

hypothetical protein
0.9261

264318

(Tp_CCHH25) regulator [Rayko]
0.9251

4959

hypothetical protein
0.9242

269439

hypothetical protein
0.9226

33225

MYSc
0.9206

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GH38-57_N_LamB_YdjC_SF superfamily Catalytic domain of glycoside hydrolase (GH) families 38 and 57, lactam utilization protein LamB/... - 340.344 1.72E-115 107 - 368 superfamily 266542

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_52108 PHATR_52108 179411 220670 431298 Not available AT5G13980.3 360129

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments