20577 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20577 chr_1 hypothetical protein 112803 115348 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7451505 Thaps20577.4, Thaps20577.3, Thaps20577.2, Thaps20577.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0363

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0013
 0.47

Most Highly Correlated Transcripts

270222

0.9288

25944

p450 superfamily
0.8689

20823

nt_trans superfamily
0.8126

9247

hypothetical protein
0.8117

36649

SufE superfamily
0.8101

33915

Mito_carr
0.8099

33511

hypothetical protein
0.8049

34191

CobN_like
0.8035

2594

hypothetical protein
0.7996

268761

hypothetical protein
0.7922

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008766 GO:0016881 GO:0018169 -

GO:0008766

UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity

Details: 
Catalysis of the reaction: ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate + D-alanyl-D-alanine = ADP + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanyl-D-alanine.
GO Category: 
MF

GO:0016881

acid-amino acid ligase activity

Details: 
Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
GO Category: 
MF

GO:0018169

ribosomal S6-glutamic acid ligase activity

Details: 
Catalysis of the posttranslational transfer of one or more glutamic acid residues to the C-terminus of ribosomal protein S6.
GO Category: 
MF

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