20953 Tryp_SPc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20953 chr_1 Tryp_SPc 2182004 2190328 - Tryp_SPc

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0469

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0219
 0.41

Most Highly Correlated Transcripts

263301

Chitin_synth_C
0.804

263298

Chitin_synth_C
0.7944

25067

hypothetical protein
0.7891

7791

hypothetical protein
0.784

21861

hypothetical protein
0.7835

6832

hypothetical protein
0.7773

25080

hypothetical protein
0.7655

7256

hypothetical protein
0.7648

4570

hypothetical protein
0.7565

23419

M6dom_TIGR03296
0.7525

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Tryp_SPc superfamily Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are... - 170.92 7.08E-47 137 - 402 superfamily 238113
Tryp_SPc superfamily Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are... - 170.92 7.08E-47 137 - 402 superfamily 238113
Tryp_SPc Trypsin-like serine protease; Many of these are synthesised as inactive precursor zymogens that are... - 171.707 3.84E-47 127 - 399 multi-dom 214473

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41359 PHATRDRAFT_41359 244256 294887 Not available Not available Not available 352675

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004295 GO:0006508 GO:0004263 GO:0008152 GO:0016491 -

GO:0004295

NA

Details: 
NA
GO Category: 
NA

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004263

NA

Details: 
NA
GO Category: 
NA

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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