21026 PRP21_like_P superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
21026 chr_1 PRP21_like_P superfamily 2584952 2587455 - PRP21_like_P superfamily
NCBI ID Ensembl Genomes exon ID
7447606 Thaps21026.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0254
EEP superfamily
0.9283
hypothetical protein
0.9015
PBPb
0.8908
hypothetical protein
0.8904
Bromodomain superfamily
0.8857
FAAL
0.8853
hypothetical protein
0.8778
hypothetical protein
0.8701
hypothetical protein
0.8681
hypothetical protein
0.8668
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRP21_like_P superfamily Pre-mRNA splicing factor PRP21 like protein; This domain family is found in eukaryotes, and is... - 122.944 2.67E-31 308 - 511 superfamily 256914
SWAP Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible... cl02715 62.6049 3.68E-12 15 - 69 specific 197818
Surp superfamily Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-... - 62.6049 3.68E-12 15 - 69 superfamily 261419
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 62.4727 7.54E-12 689 - 764 superfamily 260222
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50309 PHATRDRAFT_50309 235012 296307 234832 Cre06.g307450.t1.2 AT1G14650.2 481939
KEGG description KEGG Pathway
Spliceosome map03040
GO:0003723 GO:0006396 GO:0006464 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

RNA processing

Details: 
Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
GO Category: 
BP

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP
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