21527 RWD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21527 chr_2 RWD 2256730 2258060 - RWD

Synonyms

NCBI ID Ensembl Genomes exon ID
7450444 Thaps21527.2, Thaps21527.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0055

Most Highly Correlated Transcripts

41655

Chloroa_b-bind
0.9135

19826

LSm1
0.9129

1429

hypothetical protein
0.9065

35541

Cis_IPPS
0.8974

262305

DnaJ_bact
0.8968

31757

PLPDE_III_YBL036c_euk
0.8936

25033

tRNA_bind_EMAP-II_like
0.8935

bd96

(bd96) eIF-3_zeta
0.8889

5105

hypothetical protein
0.8885

5784

hypothetical protein
0.8835

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RWD RWD domain; This domain was identified in WD40 repeat proteins and Ring finger domain proteins. The... cl02687 75.8291 2.37E-17 30 - 144 specific 253380
RWD superfamily RWD domain; This domain was identified in WD40 repeat proteins and Ring finger domain proteins. The... - 75.8291 2.37E-17 30 - 144 superfamily 261407

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45236 PHATRDRAFT_45236 232348 320454 Not available Not available Not available 313308

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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