21927 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21927 chr_3 HA 1819450 1821303 - HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7445337 Thaps21927.1, Thaps21927.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0361

Most Highly Correlated Transcripts

12899

AAA
0.8544

264598

AAA
0.8521

27556

HSH155
0.8482

7356

Nudix_Hydrolase superfamily
0.8465

13448

Sec1
0.8455

7839

7tm_3
0.8411

25214

PRK02224
0.8407

268084

SKIP_SNW
0.8392

24919

hypothetical protein
0.8391

268118

WD40
0.8386

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 67.3305 5.46E-14 244 - 310 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 67.3305 5.46E-14 244 - 310 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 67.3305 5.46E-14 244 - 310 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 67.3305 5.46E-14 244 - 310 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 228469 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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