22476 (RL13e) Ribosomal_L13e superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
22476 chr_4 (RL13e) Ribosomal_L13e superfamily 2183832 2184510 + Ribosomal_L13e superfamily
NCBI ID Ensembl Genomes exon ID
7452242 Thaps22476.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0047
Normalized Mean Residue
Thaps_bicluster_0227
0.33
(RL7) Ribosomal_L7_archeal_euk
0.9203
(RL6) KOW_RPL6
0.9158
(RS8) PTZ00148
0.9021
Ribosomal_L7Ae superfamily
0.8984
PTZ00084
0.8922
(RS15A) PTZ00158
0.8874
(RL18) Ribosomal_L18e superfamily
0.8712
(RL17) Ribosomal_L22
0.8703
(RS4) PLN00036
0.8685
(RL26) KOW_RPL26
0.8683
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L13e superfamily Ribosomal protein L13e; Ribosomal protein L13e. - 161.146 1.57E-49 6 - 188 superfamily 261075
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15619 PHATRDRAFT_15619 270028 310273 415433 Cre14.g630100.t1.2 AT3G49010.3 356191
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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