22823 Maf1 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
22823	chr_5	Maf1 superfamily	1586431	1588576	-	Maf1 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448166	Thaps22823.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0405

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0126	0.34	1.5 22000

Most Highly Correlated Transcripts

23052 CAP_GLY 0.9132	1275 hypothetical protein 0.9079	10400 hypothetical protein 0.8979	25198 HA 0.8965	6047 TLD superfamily 0.8963	262675 AAA 0.896
3242 hypothetical protein 0.895	4565 hypothetical protein 0.8915	6603 hypothetical protein 0.8906	3493 hypothetical protein 0.8905

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Maf1 superfamily		Maf1 regulator; Maf1 is a negative regulator of RNA polymerase III. It targets the initiation...	-	85.9138	2.84E-19	335 - 544	superfamily	261177

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_49010	PHATRDRAFT_49010	267110	249470	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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