2287 AAA_17 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
2287	chr_2	AAA_17 superfamily	632689	633795	-	AAA_17 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448703	Thaps2287.2, Thaps2287.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0101

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0116	0.38	0.00003 12000

Most Highly Correlated Transcripts

268592 VDE superfamily 0.9002	4171 hypothetical protein 0.8937	bd1350 (bd1350) psaF 0.8828	1724 hypothetical protein 0.8803	bd1645 (bd1645) tpt 0.8793	5094 hypothetical protein 0.878
bd1820 (bd1820) Fasciclin 0.8714	40193 NA 0.8713	bd1306 (bd1306) NA 0.8658	20405 GRX_GRXh_1_2_like 0.8648

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAA_17 superfamily		AAA domain; AAA domain.	-	63.2695	3.22E-12	79 - 253	superfamily	267481

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	202395	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments