23095 UBCc
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
23095 chr_6 UBCc 852801 853415 + UBCc
NCBI ID Ensembl Genomes exon ID
7445929 Thaps23095.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0318
Normalized Mean Residue
Thaps_bicluster_0147
0.38
(bd1939) NA
0.8898
efThoc1 superfamily
0.8626
PKc_like superfamily
0.8609
(bd381) NA
0.8504
AAA_11
0.8392
XRN_N superfamily
0.8317
hypothetical protein
0.8299
(Tp_Myb2R9) PLN03142
0.8297
COG5222
0.8281
H2TH superfamily
0.8266
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBCc Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... cl00154 153.127 2.60E-47 10 - 141 specific 238117
UBCc superfamily Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... - 153.127 2.60E-47 10 - 141 superfamily 260221
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47555 PHATRDRAFT_47555 177939 250679 Not available Cre05.g240150.t1.2 AT5G25760.2 540360
KEGG description KEGG Pathway
Not available Not available
GO:0004840 GO:0006464 GO:0006512 GO:0004842 -

NA

Details: 
NA
GO Category: 
NA

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF
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