23645 DUF3638 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
23645	chr_7	DUF3638 superfamily	1976433	1991721	-	DUF3638 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450625	Thaps23645.16, Thaps23645.20, Thaps23645.17, Thaps23645.5, Thaps23645.2, Thaps23645.22, Thaps23645.6, Thaps23645.8, Thaps23645.9, Thaps23645.3, Thaps23645.18, Thaps23645.1, Thaps23645.21, Thaps23645.4, Thaps23645.11, Thaps23645.19, Thaps23645.7, Thaps23645.15, Thaps23645.10, Thaps23645.13, Thaps23645.14, Thaps23645.12

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0163

Most Highly Correlated Transcripts

24035 Peptidase_C19 superfamily 0.9223	25593 hypothetical protein 0.9099	263997 (APA1) Adaptin_N 0.8949	21158 hypothetical protein 0.8942	26140 PRP8 0.8936	25613 PI3Kc_like superfamily 0.8914
23971 zf-UBR 0.8903	7217 hypothetical protein 0.8902	10172 SpoVK 0.8881	21997 TPR_12 0.8866

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	66.8025	1.33E-12	4188 - 4249	superfamily	238008
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	66.8025	1.33E-12	4188 - 4249	superfamily	238008
DUF3638 superfamily		Protein of unknown function (DUF3638); This domain family is found in eukaryotes, and is...	-	76.4743	9.78E-15	2812 - 2944	superfamily	256991
DUF3645 superfamily		Protein of unknown function (DUF3645); This domain family is found in eukaryotes, and is...	-	69.5926	1.01E-13	3211 - 3244	superfamily	257005
DUF3645 superfamily		Protein of unknown function (DUF3645); This domain family is found in eukaryotes, and is...	-	69.5926	1.01E-13	3211 - 3244	superfamily	257005

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	234116	295586	240879	Cre16.g651450.t1.1	Not available	317136

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005509 GO:0004402 -

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