25356 DUF1325 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25356	chr_18	DUF1325 superfamily	335224	340351	-	DUF1325 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442967	Thaps25356.5, Thaps25356.1, Thaps25356.6, Thaps25356.8, Thaps25356.7, Thaps25356.10, Thaps25356.9, Thaps25356.4, Thaps25356.2, Thaps25356.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0128

Most Highly Correlated Transcripts

24063 COG3899 0.938	25600 hypothetical protein 0.9375	7121 DUF3684 superfamily 0.9348	22333 hypothetical protein 0.9309	1216 hypothetical protein 0.9286	263610 COG3899 0.9207
8762 SNF2_N 0.9198	23279 Tho2 0.9149	22947 zf-UBR 0.9148	25451 AAA superfamily 0.9108

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF1325 superfamily		SGF29 tudor-like domain; This domain is found in the yeast protein SAGA-associated factor 29. This...	-	65.0432	5.18E-12	1151 - 1298	superfamily	254032

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43258	PHATRDRAFT_43258	232734	288401	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004402 -

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