24231 C2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24231 chr_10 C2 superfamily 864648 877783 + C2 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0415

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0095
 0.37

Most Highly Correlated Transcripts

23587

hypothetical protein
0.9439

23582

hypothetical protein
0.9395

23494

hypothetical protein
0.9361

24753

C2
0.9132

24688

hypothetical protein
0.908

23332

COG0790
0.896

22922

hypothetical protein
0.895

23279

Tho2
0.8948

21538

PLN02666
0.8935

28816

(RPC1) PRK08566
0.8934

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
C2 superfamily C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-... - 75.0576 1.88E-14 1558 - 1722 superfamily 265430
DHR2_DOCK superfamily Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins; DOCK proteins comprise... - 68.0934 1.60E-11 3458 - 3805 superfamily 262791

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_44084 PHATR_44084 212974 248066 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004308 -

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

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