24303 DUF647 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24303	chr_11a	DUF647 superfamily	191637	193976	-	DUF647 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444539	Thaps24303.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0321

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0258	0.30	6400000 0.019

Most Highly Correlated Transcripts

268835 (ECI1) ECH 0.8577	29771 PIKKc_TOR 0.8467	2837 hypothetical protein 0.8357	22070 SRPBCC superfamily 0.8344	4066 hypothetical protein 0.8297	12141 metX superfamily 0.8205
3781 hypothetical protein 0.8185	268616 CRM1 0.8172	12960 Vac14_Fig4_bd 0.8167	16372 Aldo_ket_red 0.8156

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF647 superfamily		Vitamin B6 photo-protection and homoeostasis; In plants, this domain plays a role in auxin-...	-	209.827	2.80E-62	239 - 535	superfamily	252855

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_36001	PHATRDRAFT_36001	139061	174143	Not available	Cre12.g560250.t1.2	Not available	546234

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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