29771 PIKKc_TOR
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
29771 chr_12 PIKKc_TOR 1082105 1092285 + PIKKc_TOR

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0321

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0135
 0.41

Most Highly Correlated Transcripts

24303

DUF647 superfamily
0.8467

36301

HMG-box
0.8465

2837

hypothetical protein
0.845

262677

0.8393

20666

RabGAP-TBC
0.8382

10533

hypothetical protein
0.8356

24231

C2 superfamily
0.831

268616

CRM1
0.8258

12960

Vac14_Fig4_bd
0.8231

1768

hypothetical protein
0.8202

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger... cl00119 532.491 3.95E-173 2010 - 2289 specific 119429
PI3Kc_like superfamily Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain... - 532.491 3.95E-173 2010 - 2289 superfamily 260202
Rapamycin_bind superfamily Rapamycin binding domain; This domain forms an alpha helical structure and binds to rapamycin. - 151.217 1.12E-41 1876 - 1971 superfamily 255029
Rapamycin_bind superfamily Rapamycin binding domain; This domain forms an alpha helical structure and binds to rapamycin. - 151.217 1.12E-41 1876 - 1971 superfamily 255029
DUF3385 superfamily Domain of unknown function (DUF3385); This domain is functionally uncharacterized. This domain is... - 136.24 8.83E-36 719 - 889 superfamily 256685
DUF3385 superfamily Domain of unknown function (DUF3385); This domain is functionally uncharacterized. This domain is... - 136.24 8.83E-36 719 - 889 superfamily 256685
FATC superfamily FATC domain; The FATC domain is named after FRAP, ATM, TRRAP C-terminal. The solution structure of... - 68.2605 1.43E-13 2389 - 2421 superfamily 251190
FATC superfamily FATC domain; The FATC domain is named after FRAP, ATM, TRRAP C-terminal. The solution structure of... - 68.2605 1.43E-13 2389 - 2421 superfamily 251190
FAT FAT domain; The FAT domain is named after FRAP, ATM and TRRAP. - 191.044 1.90E-52 1415 - 1769 multi-dom 251189

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_21660 PHATRDRAFT_21660 206244 318014 312679 Cre09.g400553.t1.1 AT1G50030.1 284697

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016773 GO:0004429 GO:0015072 GO:0015073 GO:0016303 -

GO:0016773

phosphotransferase activity, alcohol group as acceptor

Details: 
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
GO Category: 
MF

GO:0004429

NA

Details: 
NA
GO Category: 
NA

GO:0015072

NA

Details: 
NA
GO Category: 
NA

GO:0015073

NA

Details: 
NA
GO Category: 
NA

GO:0016303

1-phosphatidylinositol-3-kinase activity

Details: 
Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol + ATP = a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ADP + 2 H(+).
GO Category: 
MF

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