24377 (Tp_CCHH22) P4Hc
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
24377 chr_11a (Tp_CCHH22) P4Hc 683648 686015 - P4Hc
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0078
P4Hc
0.886
hypothetical protein
0.8716
hypothetical protein
0.8681
PKc_like superfamily
0.866
(CAS1) squalene_cyclas
0.8647
hypothetical protein
0.8611
hypothetical protein
0.8611
hypothetical protein
0.8576
UCH
0.8526
(Tp_Myb1R2) SANT_TRF
0.8511
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
P4Hc Prolyl 4-hydroxylase alpha subunit homologues; Mammalian enzymes catalyse hydroxylation of collagen... cl17304 105.933 1.30E-26 350 - 528 specific 214780
2OG-FeII_Oxy_3 superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 105.933 1.30E-26 350 - 528 superfamily 266616
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 119786 Not available Not available Not available
KEGG description KEGG Pathway
Metabolic pathways map01100
GO:0016706 GO:0019538 GO:0003676 GO:0005634 GO:0008270 -

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Details: 
Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.
GO Category: 
MF

protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
GO Category: 
BP

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF
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