25112 (Tp_HSF_3.2b) HSF_DNA-bind
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
25112 chr_16a (Tp_HSF_3.2b) HSF_DNA-bind 138122 139307 + HSF_DNA-bind
NCBI ID Ensembl Genomes exon ID
7442494 Thaps25112.2, Thaps25112.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0115
Normalized Mean Residue
Thaps_bicluster_0007
0.40
(bd1890) NA
0.9394
(bd1692) NA
0.877
(bd877) NA
0.877
(bd1877) NA
0.8584
(bd1840) NA
0.8553
(bd690) NA
0.853
(bd738) NA
0.8415
(bd1801) NA
0.8403
(bd1835) NA
0.833
(bd737) NA
0.8312
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HSF_DNA-bind HSF-type DNA-binding; HSF-type DNA-binding. cl12113 87.1702 1.12E-21 106 - 197 specific 249865
HSF_DNA-bind superfamily HSF-type DNA-binding; HSF-type DNA-binding. - 87.1702 1.12E-21 106 - 197 superfamily 264552
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 360816
KEGG description KEGG Pathway
Not available Not available
GO:0003700 GO:0005634 GO:0006355 GO:0003677 -

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF
Log in to post comments