25225 Cullin_binding superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25225	chr_17	Cullin_binding superfamily	171080	172267	+	Cullin_binding superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453127	Thaps25225.3, Thaps25225.2, Thaps25225.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0200

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0194	0.41	1.9 2.2

Most Highly Correlated Transcripts

9247 hypothetical protein 0.9132	37497 cysE 0.9031	36007 Aldolase_II superfamily 0.8972	4462 hypothetical protein 0.8967	262819 TPR 0.8788	11614 ATP_bind_1 0.8776
264598 AAA 0.8769	13448 Sec1 0.8697	264556 FBPase 0.8696	261278 GRX_GRXh_1_2_like 0.8688

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cullin_binding superfamily		Cullin binding; This domain binds to cullins and to Rbx-1, components of an E3 ubiquitin ligase...	-	102.637	2.40E-27	110 - 235	superfamily	252026

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	169915	287723	451253	Cre12.g487400.t1.2	AT3G12760.1	284121

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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