25724 AIM24Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25724	chr_22	AIM24	437192	439250	+	AIM24

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442832	Thaps25724.1, Thaps25724.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0213

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0140	0.29	0.25 0.43

Most Highly Correlated Transcripts

31535 cyclophilin_ABH_like 0.8891	9459 Thioredoxin_like superfamily 0.8832	17214 PLN02512 0.8831	29506 cpn10 0.8818	21978 hypothetical protein 0.8794	4130 hypothetical protein 0.8753
40713 SodA 0.8687	26991 GRX_GRXh_1_2_like 0.8673	35401 COG0523 0.8667	10885 hypothetical protein 0.8656

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AIM24		Mitochondrial biogenesis AIM24; In eukaryotes, this domain is involved in mitochondrial biogenesis...	cl00884	179.321	4.15E-52	190 - 435	specific	251018
AIM24 superfamily		Mitochondrial biogenesis AIM24; In eukaryotes, this domain is involved in mitochondrial biogenesis...	-	179.321	4.15E-52	190 - 435	superfamily	260679

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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