25739 vWFA
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
25739 chr_22 vWFA 527863 530471 - vWFA
NCBI ID Ensembl Genomes exon ID
7443891 Thaps25739.1, Thaps25739.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0481
Normalized Mean Residue
Thaps_bicluster_0082
0.46
(bd690) NA
0.9412
(bd1801) NA
0.9258
(bd738) NA
0.9235
(bd1934) NA
0.9148
(bd737) NA
0.8933
(bd735) NA
0.8724
(bd1946) NA
0.8485
(bd1877) NA
0.8476
(bd1692) NA
0.8425
(bd1813) NA
0.8403
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
vWFA Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von... cl00057 74.1394 4.05E-15 608 - 797 specific 238119
vWFA superfamily Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von... - 74.1394 4.05E-15 608 - 797 superfamily 260163
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264109 Not available 277428 309172 Not available Not available AT2G47130.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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