25846 PDI_a_family
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25846 chr_23 PDI_a_family 232314 234089 - PDI_a_family

Synonyms

NCBI ID Ensembl Genomes exon ID
7448880 Thaps25846.3, Thaps25846.2, Thaps25846.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0138

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0171
 0.35

Most Highly Correlated Transcripts

20595

Choline_transpo
0.8667

34514

PLN02539
0.8612

25860

hypothetical protein
0.8549

263836

Ggt
0.8531

21308

RING
0.8527

9884

hypothetical protein
0.8492

6426

hypothetical protein
0.8467

5807

hypothetical protein
0.8455

24387

vWFA superfamily
0.8394

5734

hypothetical protein
0.8392

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic... cl00388 109.622 5.33E-29 182 - 284 specific 239259
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 109.622 5.33E-29 182 - 284 superfamily 260398
COPIIcoated_ERV superfamily Endoplasmic reticulum vesicle transporter; This family is conserved from plants and fungi to humans... - 86.585 1.81E-19 291 - 475 superfamily 254553
ERGIC_N superfamily Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); This family is the N-terminal of... - 80.6134 1.93E-18 44 - 133 superfamily 258122

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 GO:0003756 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0003756

protein disulfide isomerase activity

Details: 
Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins.
GO Category: 
MF

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