263836 GgtThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
263836	chr_11a	Ggt	797292	799323	+	Ggt

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444514	Thaps263836.1, Thaps263836.3, Thaps263836.4, Thaps263836.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0140

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0180	0.31	110000 16

Most Highly Correlated Transcripts

264759 Ggt 0.9966	29322 AAT_I superfamily 0.8982	24480 ECM4 0.888	21603 hypothetical protein 0.8777	263810 PTZ00430 0.8683	7469 hypothetical protein 0.8673
6066 APG6 0.8665	269573 Peptidase_C1A 0.8654	25860 hypothetical protein 0.8642	3914 hypothetical protein 0.8629

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ggt		Gamma-glutamyltransferase [Amino acid transport and metabolism]	cl19223	407.002	8.21E-135	23 - 595	specific	223482
G_glu_transpept superfamily		Gamma-glutamyltranspeptidase; Gamma-glutamyltranspeptidase.	-	407.002	8.21E-135	23 - 595	superfamily	267576

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

GO:0003840 -

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