260841 CysJ
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
260841 chr_1 CysJ 883246 885242 - CysJ

Synonyms

NCBI ID Ensembl Genomes exon ID
7445665 Thaps260841.2, Thaps260841.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0006

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0048
 0.39

Most Highly Correlated Transcripts

bd950

(bd950) NA
0.9079

bd951

(bd951) NA
0.8863

8058

hypothetical protein
0.8828

36037

Trypsin_2
0.8757

bd843

(bd843) NA
0.8707

16075

tpt
0.8597

261184

ACD_sHsps-like
0.8551

bd758

(bd758) NA
0.8545

17214

PLN02512
0.8532

21255

SYLF
0.8513

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FNR_like superfamily Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a... - 233.319 8.07E-70 262 - 635 superfamily 263080
Flavodoxin_1 Flavodoxin; Flavodoxin. cl00438 96.3013 2.99E-23 77 - 208 specific 249722
FMN_red superfamily NADPH-dependent FMN reductase; NADPH-dependent FMN reductase. - 96.3013 2.99E-23 77 - 208 superfamily 260423
CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] - 282.385 4.66E-86 59 - 635 multi-dom 223446

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 GO:0016491 GO:0010181 GO:0003958 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0010181

FMN binding

Details: 
Interacting selectively and non-covalently with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
GO Category: 
MF

GO:0003958

NADPH-hemoprotein reductase activity

Details: 
Catalysis of the reaction: NADPH + H+ + n oxidized hemoprotein = NADP+ + n reduced hemoprotein.
GO Category: 
MF

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