269988 tRNA_Me_trans
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
269988 chr_19b_31 tRNA_Me_trans 19888 21907 - tRNA_Me_trans
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0196
DUF72
0.9132
hypothetical protein
0.9021
NA
0.8994
hypothetical protein
0.8989
0.8964
hypothetical protein
0.8936
Fumble
0.8934
2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_
0.892
ABC_ATPase superfamily
0.8912
Cullin
0.8892
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
tRNA_Me_trans tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-... cl00292 376.862 8.46E-127 96 - 489 specific 238956
AANH_like superfamily Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases... - 376.862 8.46E-127 96 - 489 superfamily 260331
tRNA_Me_trans tRNA methyl transferase; This family represents tRNA(5-methylaminomethyl-2-thiouridine)-... - 371.195 1.77E-124 96 - 489 multi-dom 251696
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_3425 PHATRDRAFT_3425 205230 234685 437795 Not available Not available 563700
KEGG description KEGG Pathway
Not available Not available
GO:0004808 GO:0005737 GO:0008033 -

tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing 5-aminomethyl-2-thiouridine = S-adenosyl-L-homocysteine + tRNA containing 5-methylaminomethyl-2-thiouridylate.
GO Category: 
MF

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

tRNA processing

Details: 
The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
GO Category: 
BP
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