26192 (GDH_2) PTZ00079
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26192 chr_4 (GDH_2) PTZ00079 611706 613513 + PTZ00079

Synonyms

NCBI ID Ensembl Genomes exon ID
7447481 Thaps26192.1, Thaps26192.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0127

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0109
 0.50

Most Highly Correlated Transcripts

269160

(gltD) GltD
0.8512

1310

DadA
0.8373

264891

Glyco_hydro_30 superfamily
0.8352

262719

CHD
0.8276

21640

Iso_dh superfamily
0.8141

36716

(LPD) PRK06327
0.813

13556

BglC
0.8115

264364

PLN02929
0.8115

268472

Sugar_tr
0.8

264537

Aa_trans superfamily
0.7964

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_bind_amino_acid_DH superfamily NAD(P) binding domain of amino acid dehydrogenase-like proteins; Amino acid dehydrogenase(DH)-like... - 181.661 3.48E-53 278 - 502 superfamily 266569
ELFV_dehydrog_N superfamily Glu/Leu/Phe/Val dehydrogenase, dimerization domain; Glu/Leu/Phe/Val dehydrogenase, dimerization... - 133.004 5.14E-37 128 - 258 superfamily 251546
ELFV_dehydrog_N superfamily Glu/Leu/Phe/Val dehydrogenase, dimerization domain; Glu/Leu/Phe/Val dehydrogenase, dimerization... - 133.004 5.14E-37 128 - 258 superfamily 251546
PTZ00079 NADP-specific glutamate dehydrogenase; Provisional - 385.624 6.39E-129 81 - 504 multi-dom 185433

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50971 PHATRDRAFT_50971 209458 326387 Not available Not available Not available 523689

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0006520 GO:0016491 GO:0004354 -

GO:0006520

cellular amino acid metabolic process

Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004354

glutamate dehydrogenase (NADP+) activity

Details: 
Catalysis of the reaction: L-glutamate + H2O + NADP+ = 2-oxoglutarate + NH3 + NADPH + H+.
GO Category: 
MF

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