26224 SPFH_prohibitin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26224 chr_4 SPFH_prohibitin 2318582 2319613 + SPFH_prohibitin

Synonyms

NCBI ID Ensembl Genomes exon ID
7451415 Thaps26224.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0199

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0013
 0.47

Most Highly Correlated Transcripts

35136

NA
0.9144

516

(RPT5) RPT1
0.8921

11068

(PSA6) proteasome_alpha_type_6
0.8901

41655

Chloroa_b-bind
0.8821

35314

GSH_Peroxidase
0.8803

7953

AIM24
0.8782

25068

hypothetical protein
0.8772

6693

hypothetical protein
0.8756

9247

hypothetical protein
0.8752

40962

(RPN8) PLN03246
0.8749

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SPFH_prohibitin Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model... cl19107 254.745 1.28E-84 26 - 221 specific 259799
SPFH_like superfamily core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model... - 254.745 1.28E-84 26 - 221 superfamily 267460
PHB prohibitin homologues; prohibitin homologues - 112.754 2.15E-30 24 - 187 multi-dom 214581

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54960 PHATRDRAFT_54960 269289 294377 63063 Cre12.g519350.t1.2 AT5G40770.1 537928

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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