262251 Nucleotidyl_cyc_III superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262251 chr_4 Nucleotidyl_cyc_III superfamily 1652509 1653644 - Nucleotidyl_cyc_III superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451914 Thaps262251.1, Thaps262251.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0272

Most Highly Correlated Transcripts

33225

MYSc
0.9267

269439

hypothetical protein
0.9232

263786

(ZFP20) zf-TAZ
0.9184

262826

DUF3608 superfamily
0.9118

7202

ABCC_MRP_domain1
0.911

264576

lysozyme_like superfamily
0.9103

31437

Peptidase_M16 superfamily
0.9066

24642

PLN02286
0.9048

33984

PKc_like superfamily
0.9048

27435

PAH
0.9048

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nucleotidyl_cyc_III superfamily Class III nucleotidyl cyclases; Class III nucleotidyl cyclases are the largest, most diverse group... - 64.1375 1.61E-12 233 - 358 superfamily 264492

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0007242 GO:0009190 GO:0016849 -

GO:0007242

NA

Details: 
NA
GO Category: 
NA

GO:0009190

cyclic nucleotide biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.
GO Category: 
BP

GO:0016849

phosphorus-oxygen lyase activity

Details: 
Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.
GO Category: 
MF

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