7202 ABCC_MRP_domain1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7202 chr_7 ABCC_MRP_domain1 1561094 1564342 + ABCC_MRP_domain1

Synonyms

NCBI ID Ensembl Genomes exon ID
7450713 Thaps7202.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0088

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0020
 0.47

Most Highly Correlated Transcripts

33225

MYSc
0.9436

263947

SNF2_N
0.9404

262826

DUF3608 superfamily
0.9392

261059

hypothetical protein
0.932

37960

(MYO5) MYSc
0.9303

262527

pi 4-kinase
0.9277

27435

PAH
0.9263

262171

CAP_ED
0.925

262152

hypothetical protein
0.9228

33984

PKc_like superfamily
0.9205

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCC_MRP_domain1 ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C; This... cl17201 309.014 1.69E-97 630 - 824 specific 213217
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 309.014 1.69E-97 630 - 824 superfamily 266551
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 122.402 1.90E-30 205 - 477 superfamily 250039
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 122.402 1.90E-30 205 - 477 superfamily 250039
MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] - 206.896 7.54E-57 186 - 843 multi-dom 224055

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_18826 PHATR_18826 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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