263205 SPFH_prohibitin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263205 chr_7 SPFH_prohibitin 1125546 1126631 + SPFH_prohibitin

Synonyms

NCBI ID Ensembl Genomes exon ID
7447077 Thaps263205.1, Thaps263205.2, Thaps263205.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0253

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0007
 0.40

Most Highly Correlated Transcripts

bd634

(bd634) NA
0.8856

bd1192

(bd1192) Acyl_ACP_Desat
0.8722

bd1290

(bd1290) atpH
0.8473

bd1378

(bd1378) atpI
0.8334

bd1161

(bd1161) NA
0.833

bd894

(bd894) Peptidase_M14_like superfamily
0.8228

bd718

(bd718) PRK10387
0.8134

bd1318

(bd1318) atpF
0.811

bd1866

(bd1866) NA
0.811

plastid_psb28

0.81

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SPFH_prohibitin Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model... cl19107 203.899 1.33E-64 62 - 254 specific 259799
SPFH_like superfamily core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily; This model... - 203.899 1.33E-64 62 - 254 superfamily 267460
HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein... - 105.988 1.13E-26 41 - 290 multi-dom 223407

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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