264461 Tryp_SPc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264461 chr_17 Tryp_SPc 432479 433680 - Tryp_SPc

Synonyms

NCBI ID Ensembl Genomes exon ID
7442131 Thaps264461.3, Thaps264461.4, Thaps264461.2, Thaps264461.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0194

Most Highly Correlated Transcripts

261056

(APB3) Adaptin_N
0.8899

23130

NT_PAP_TUTase
0.8814

261357

NAD_binding_8 superfamily
0.8802

263610

COG3899
0.8765

31575

AAA_12
0.8688

8384

hypothetical protein
0.8566

11938

NADB_Rossmann superfamily
0.8551

3331

Bac_rhamnosid superfamily
0.8539

9148

hypothetical protein
0.8485

264276

Vps8 superfamily
0.8478

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Tryp_SPc superfamily Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are... - 205.588 1.37E-64 70 - 296 superfamily 238113
Tryp_SPc superfamily Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are... - 205.588 1.37E-64 70 - 296 superfamily 238113
Tryp_SPc Trypsin-like serine protease; Many of these are synthesised as inactive precursor zymogens that are... - 204.834 2.35E-64 70 - 293 multi-dom 214473

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004295 GO:0006508 GO:0004263 -

GO:0004295

NA

Details: 
NA
GO Category: 
NA

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004263

NA

Details: 
NA
GO Category: 
NA

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