264901 (Ppx1) PLN02576
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264901 chr_23 (Ppx1) PLN02576 211312 213036 - PLN02576

Synonyms

NCBI ID Ensembl Genomes exon ID
7442648 Thaps264901.3, Thaps264901.2, Thaps264901.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0102
 0.20

Most Highly Correlated Transcripts

2465

hypothetical protein
0.9497

261608

PLN02585
0.9446

5077

PLN00015
0.9425

37615

NADB_Rossmann superfamily
0.9366

270378

hypothetical protein
0.935

2036

hypothetical protein
0.9303

37294

AarF
0.9298

35871

2-Hacid_dh_1
0.9183

283

FHIT
0.912

3326

TauD
0.9119

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02576 protoporphyrinogen oxidase - 703.31 0 41 - 558 multi-dom 215314

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_31109 PHATRDRAFT_31109 261082 177192 74870 Cre09.g396300.t1.2 AT4G01690.1 298682

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0006118 GO:0016491 GO:0004729 GO:0006779 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004729

oxygen-dependent protoporphyrinogen oxidase activity

Details: 
Catalysis of the reaction: 3 O(2) + protoporphyrinogen IX = 3 H(2)O(2) + protoporphyrin IX.
GO Category: 
MF

GO:0006779

porphyrin-containing compound biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.
GO Category: 
BP

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