268286 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268286 chr_2 hypothetical protein 1253201 1254025 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7444685 Thaps268286.2, Thaps268286.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0311

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0018
 0.42

Most Highly Correlated Transcripts

bd1841

(bd1841) CAP10 superfamily
0.8347

21067

FMN_red
0.8264

bd410

(bd410) HNHc
0.8248

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8217

bd1840

(bd1840) NA
0.819

bd1934

(bd1934) NA
0.8176

bd1839

(bd1839) NA
0.8098

25012

hypothetical protein
0.8025

36108

hypothetical protein
0.8011

bd1756

(bd1756) NA
0.7992

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45558 PHATRDRAFT_45558 137695 150640 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0015520 GO:0015904 GO:0016021 GO:0005215 GO:0006810 -

GO:0015520

tetracycline:hydrogen antiporter activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out).
GO Category: 
MF

GO:0015904

tetracycline transport

Details: 
The directed movement of tetracycline into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles).
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

Add comment

Log in to post comments