21067 FMN_redThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21067	chr_1	FMN_red	2804237	2805260	-	FMN_red

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447636	Thaps21067.2, Thaps21067.1, Thaps21067.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0313

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0093	0.41	0.084 1.8

Most Highly Correlated Transcripts

21785 Pyr_redox_2 0.8543	656 ECM4 0.8494	5180 hypothetical protein 0.8481	25012 hypothetical protein 0.8327	268286 hypothetical protein 0.8264	6894 COG1741 0.8202
29212 (GSHS) PLN02977 0.7965	bd1155 (bd1155) GCS superfamily 0.7883	1060 GFA superfamily 0.7684	10169 hypothetical protein 0.7544

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FMN_red		NADPH-dependent FMN reductase; NADPH-dependent FMN reductase.	cl00438	80.736	4.45E-19	26 - 189	specific	251896
FMN_red superfamily		NADPH-dependent FMN reductase; NADPH-dependent FMN reductase.	-	80.736	4.45E-19	26 - 189	superfamily	260423

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_37671	PHATRDRAFT_37671	272789	197100	120452	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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